Basic Information
Locus ID:
SOLCI002246200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2159 | 25183 | 31073 | + | SOLCI002246200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 128,500.80 Da | 42.63 | 77.97 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 595 | 941 | 2.54158E-110 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 600 | 932 | 2.9E-16 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 236 | 580 | 8.55E-23 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 572 | 965 | 1.15E-59 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 183 | 576 | 7.6E-17 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 577 | 974 | 1.1E-102 | IPR036691 |
| SMART | SM00128 | i5p_5 | 593 | 947 | 7.8E-86 | IPR000300 |
| SMART | SM00320 | WD40_4 | 491 | 528 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 274 | 312 | 0.36 | IPR001680 |
| SMART | SM00320 | WD40_4 | 530 | 567 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 226 | 264 | 12.0 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 971 | 1130 | 8.70179 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1109 | 1158 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_004244775.1 | type I inositol polyphosphate 5-phosphatase 12-like [Solanum lycopersicum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BTR1 | MSP domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_007916 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology