Basic Information
Locus ID:
SOLCI002216100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2139 | 48682 | 51083 | - | SOLCI002216100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 84,315.65 Da | 32.78 | 106.48 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 308 | 368 | 2.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 646 | 704 | 5.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 431 | 492 | 2.7E-6 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 181 | 197 | 1.7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 84 | 2.4E-11 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 378 | 395 | 0.42 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 230 | 245 | 0.35 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 227 | 451 | 3.77E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 409 | 736 | 1.16E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 293 | 1.49E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 745 | 6.7E-185 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 560 | 616 | 2.3E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 456 | 479 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 256 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 355 | 379 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 643 | 666 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 281 | 305 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 527 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 691 | 714 | 190.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 233 | 254 | 7.665751 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 182 | 203 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 28 | 6.0 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_015084536.1 | serine/threonine-protein kinase BRI1-like 1 [Solanum pennellii] | 0 |
| Q9ZWC8 | Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana OX=3702 GN=BRL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BNC9 | non-specific serine/threonine protein kinase OS=Solanum chilense OX=4083 GN=EJD97_007779 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology