Basic Information
Locus ID:
SOLCI002195000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2124 | 20936 | 30607 | - | SOLCI002195000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 104,004.84 Da | 33.48 | 91.24 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 633 | 899 | 2.20919E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 1.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 631 | 895 | 1.7E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 301 | 4.25E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 899 | 1.78E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 288 | 394 | 7.48E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 702 | 4.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 915 | 1.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 285 | 9.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 184 | 8.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 428 | 1.3E-13 | IPR032675 |
| SMART | SM00220 | serkin_6 | 627 | 900 | 6.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 627 | 900 | 38.98653 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 267 | 289 | 8.004581 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 633 | 655 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 747 | 759 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010314121.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum lycopersicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BNH7 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_007686 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology