Basic Information
Locus ID:
SOLCI002192300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
NAC domain-containing protein 8 isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2122 | 27303 | 32023 | - | SOLCI002192300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 48,956.45 Da | 54.01 | 64.53 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 57 | 195 | 3.5E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 42 | 214 | 3.01E-39 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 65 | 219 | 9.9E-30 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 56 | 214 | 30.939356 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 261 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_004238966.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Solanum lycopersicum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BL14 | NAC domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_007672 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology