Basic Information
Locus ID:
SOLCI002153600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2099 | 51648 | 52850 | + | SOLCI002153600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 25,003.48 Da | 48.86 | 72.35 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.10.20.90 | - | 89 | 190 | 6.2E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 98 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019067014.2 | polycomb group RING finger protein 3-like [Solanum lycopersicum] | 0 |
| TrEMBL | A0A6N2BLB4 | SWIB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_007512 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636902 |
| Solanaceae | Solanum chilense | 1 | SOLCI002153600 |