Basic Information
Locus ID:
SOLCI002069200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Pyruvate decarboxylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2049 | 24228 | 27019 | + | SOLCI002069200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 64,761.15 Da | 33.45 | 86.15 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 8 | 169 | 1.62483E-94 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 367 | 575 | 6.05248E-83 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 202 | 318 | 5.1E-20 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 435 | 562 | 9.1E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 5 | 176 | 1.7E-35 | IPR012001 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 191 | 344 | 1.31E-31 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 367 | 582 | 3.99E-37 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 5 | 183 | 7.58E-45 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 192 | 354 | 1.6E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 3 | 179 | 1.6E-61 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 360 | 577 | 5.3E-54 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 421 | 587 | 1.9E-56 | IPR012110 |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 1 | 417 | 1.4E-149 | IPR012110 |
| ProSitePatterns | PS00187 | Thiamine pyrophosphate enzymes signature. | 452 | 471 | - | IPR000399 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_019069892.1 | pyruvate decarboxylase 2 isoform X1 [Solanum lycopersicum] | 0 |
| P51846 | Pyruvate decarboxylase 2 OS=Nicotiana tabacum OX=4097 GN=PDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3Q7H1V5 | pyruvate decarboxylase OS=Solanum lycopersicum OX=4081 GN=101254910 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology