Basic Information
Locus ID:
SOLCI001893300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1946 | 6257 | 15645 | + | SOLCI001893300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 55,625.04 Da | 51.13 | 69.18 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 278 | 361 | 1.8E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 101 | - | - |
| Coils | Coil | Coil | 292 | 312 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_015085476.1 | protein WVD2-like 5 [Solanum pennellii] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BQI3 | TPX2 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_006590 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology