Basic Information
Locus ID:
SOLCI001860100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1925 | 64611 | 65678 | - | SOLCI001860100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 39,955.07 Da | 40.58 | 70.84 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 169 | 202 | 5.1E-9 | IPR006652 |
| Pfam | PF07646 | Kelch motif | 206 | 250 | 3.8E-6 | IPR011498 |
| Pfam | PF13964 | Kelch motif | 107 | 156 | 1.5E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 1.44E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 338 | 1.57E-43 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 347 | 1.9E-40 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 2.4E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 4.3E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015070513.1 | F-box/kelch-repeat protein At1g80440 [Solanum pennellii] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BPM6 | F-box/kelch-repeat protein At1g80440-like OS=Solanum chilense OX=4083 GN=EJD97_006442 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology