Basic Information
Locus ID:
SOLCI001832500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1910 | 38468 | 48494 | + | SOLCI001832500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 133,139.70 Da | 43.98 | 70.14 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14133 | PKc_DYRK_like | 877 | 1179 | 1.69449E-152 | - |
| Pfam | PF00069 | Protein kinase domain | 877 | 1179 | 1.5E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 866 | 1181 | 3.1E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 871 | 958 | 2.2E-92 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 931 | 1179 | 2.2E-92 | - |
| SMART | SM00220 | serkin_6 | 877 | 1179 | 2.7E-70 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 877 | 1179 | 36.329338 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1003 | 1015 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 658 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 84 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73460.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004235378.1 | uncharacterized protein LOC101252371 isoform X1 [Solanum lycopersicum] | 0 |
| Q9NR20 | Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens OX=9606 GN=DYRK4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BT81 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_006321 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology