Basic Information
Locus ID:
SOLCI001822500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1906 | 18462 | 22946 | - | SOLCI001822500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 92,484.76 Da | 41.43 | 66.70 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 3.53273E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 3.5E-21 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 495 | 702 | 1.9E-72 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 64 | 133 | 2.49E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 166 | 1.9E-23 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 5.3E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.694839 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 7.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 7.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 7.4E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 447 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_010317534.1 | uncharacterized protein LOC101256846 [Solanum lycopersicum] | 0 |
| A7H2C0 | Chaperone protein DnaJ OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) OX=360109 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A6N2BQJ1 | J domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_006294 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology