Basic Information
Locus ID:
SOLCI001819000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold19034 | 1670 | 4886 | - | SOLCI001819000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 71,034.81 Da | 38.45 | 73.00 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 504 | 633 | 2.90349E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 269 | 398 | 5.47878E-36 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 150 | 3.50191E-47 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 152 | 1.3E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 501 | 633 | 9.9E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 269 | 398 | 1.2E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 489 | 633 | 6.41E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 259 | 398 | 7.72E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 152 | 4.97E-44 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 248 | 398 | 5.2E-47 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 483 | 633 | 7.1E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 8.7E-56 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 3.8E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 501 | 634 | 2.2E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 269 | 400 | 1.9E-37 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 490 | 634 | 46.406223 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 258 | 400 | 45.852848 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 54.603642 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 437 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_015055566.1 | jacalin-related lectin 3 isoform X2 [Solanum pennellii] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AKW7 | Jacalin-related lectin 3-like OS=Solanum chilense OX=4083 GN=EJD97_006283 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology