Basic Information
Locus ID:
SOLCI001791500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1889 | 46060 | 48225 | - | SOLCI001791500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 78,808.98 Da | 36.31 | 87.85 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 260 | 4.61326E-81 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 391 | 660 | 4.80939E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 388 | 656 | 1.5E-52 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 32 | 263 | 6.7E-55 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 267 | 4.48E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 692 | 8.75E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 679 | 1.9E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 460 | 1.0E-30 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 271 | 1.2E-61 | - |
| SMART | SM00220 | serkin_6 | 385 | 658 | 3.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 667 | 39.523624 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 504 | 516 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 143 | 149 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 414 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | NP_001307224.1 | clade VIII lectin receptor kinase precursor [Solanum lycopersicum] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BVW7 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_006158 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology