Basic Information
Locus ID:
SOLCI001728200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold18550 | 338 | 3858 | + | SOLCI001728200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 40,996.35 Da | 32.94 | 89.54 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 41 | 308 | 7.0E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 311 | 1.64E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 329 | 1.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 115 | 4.7E-34 | - |
| SMART | SM00220 | serkin_6 | 40 | 311 | 4.9E-28 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 8 | 324 | 5.2E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 320 | 36.908833 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004235951.1 | PTI1-like tyrosine-protein kinase At3g15890 [Solanum lycopersicum] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3Q7FTP2 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101249718 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology