Basic Information
Locus ID:
SOLCI001699500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold184 | 89426 | 91775 | + | SOLCI001699500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 68,151.88 Da | 42.86 | 89.92 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 15 | 74 | 7.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 104 | 187 | 1.5E-8 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 275 | 537 | 3.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 258 | 564 | 1.48E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 85 | 190 | 1.0E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 3 | 76 | 3.1E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 235 | 347 | 6.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 549 | 6.3E-56 | - |
| SMART | SM00220 | serkin_6 | 272 | 539 | 2.8E-27 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 76 | 13.257251 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 84 | 190 | 13.990471 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 272 | 545 | 35.650906 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 393 | 405 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 278 | 301 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015069267.1 | cysteine-rich receptor-like protein kinase 1 [Solanum pennellii] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2CDL3 | Cysteine-rich receptor-like protein kinase 42 OS=Solanum chilense OX=4083 GN=EJD97_005778 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology