Basic Information
Locus ID:
SOLCI001642600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
PAS fold
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1815 | 49358 | 55211 | - | SOLCI001642600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 85,206.58 Da | 46.65 | 74.23 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 129 | 231 | 7.93697E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 494 | 740 | 1.51401E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 488 | 740 | 9.4E-69 | IPR001245 |
| Pfam | PF00989 | PAS fold | 121 | 230 | 8.3E-15 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 118 | 230 | 3.49E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 739 | 1.01E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 566 | 766 | 1.5E-63 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 129 | 234 | 4.6E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 481 | 565 | 3.4E-31 | - |
| SMART | SM00220 | serkin_6 | 488 | 748 | 6.1E-59 | IPR000719 |
| SMART | SM00091 | pas_2 | 120 | 187 | 4.4E-10 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 120 | 230 | 1.6E-16 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 488 | 748 | 44.046505 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 118 | 189 | 17.539465 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 607 | 619 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 667 | 689 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 601 | 619 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 562 | 575 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 711 | 733 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 648 | 658 | 2.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 108 | - | - |
| Coils | Coil | Coil | 17 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_006349841.1 | PREDICTED: probable serine/threonine-protein kinase DDB_G0272254 isoform X1 [Solanum tuberosum] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BS72 | Serine/threonine-protein kinase CTR1 OS=Solanum chilense OX=4083 GN=EJD97_005547 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology