Basic Information
Locus ID:
SOLCI001614700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold18011 | 22527 | 28788 | - | SOLCI001614700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 80,345.07 Da | 52.88 | 93.31 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 1.8E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 429 | 688 | 1.4E-20 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 2.5E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 686 | 1.76E-38 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 190 | 2.49E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 507 | 1.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 700 | 6.9E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 215 | 7.8E-41 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 425 | 693 | 18.972788 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015071093.1 | protein MALE DISCOVERER 2-like [Solanum pennellii] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2ALT2 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_005463 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology