Basic Information
Locus ID:
SOLCI001511700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold17448 | 1022 | 5701 | - | SOLCI001511700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 72,579.10 Da | 52.78 | 90.88 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 530 | 620 | 5.5E-7 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 75 | 5.5E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 529 | 1.9E-18 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 620 | 3.46E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 231 | 7.29E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 452 | 1.8E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 453 | 627 | 1.2E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 198 | 5.3E-30 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 624 | 19.877363 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 298 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_015077064.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X1 [Solanum pennellii] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AKD0 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_005076 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology