Basic Information
Locus ID:
SOLCI001500200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
DOG1
Description:
Seed dormancy control
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold17367 | 4055 | 4894 | + | SOLCI001500200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 31,786.31 Da | 55.46 | 82.87 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 49 | 114 | 4.6E-22 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 12 | 257 | 31.535469 | IPR025422 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 279 | - | - |
| Coils | Coil | Coil | 152 | 172 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18690.1 | 0 | |
| RefSeq | XP_025885152.1 | protein DOG1-like 3 [Solanum lycopersicum] | 0 |
| Q58FV0 | Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AML0 | DOG1 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_005033 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology