Basic Information
Locus ID:
SOLCI001454600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1707 | 151822 | 157285 | + | SOLCI001454600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 67,132.09 Da | 38.88 | 96.50 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 281 | 552 | 1.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 1.9E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 5.9E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 257 | 555 | 2.7E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 166 | 2.31E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 249 | 356 | 2.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 573 | 4.8E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 178 | 2.2E-44 | IPR032675 |
| SMART | SM00220 | serkin_6 | 280 | 554 | 1.6E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 564 | 34.802868 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 308 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 582 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_004238646.1 | protein NSP-INTERACTING KINASE 3 isoform X1 [Solanum lycopersicum] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BRX8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004904 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology