Basic Information
Locus ID:
SOLCI001442800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold170 | 173417 | 176958 | - | SOLCI001442800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 101,988.91 Da | 33.10 | 91.32 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 590 | 863 | 6.75386E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 62 | 6.6E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 325 | 360 | 0.0026 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 585 | 858 | 7.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 875 | 1.17E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 435 | 1.87E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 321 | 2.6E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 447 | 3.6E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 545 | 661 | 1.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 662 | 877 | 4.2E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 431 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 109 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 0.011 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 277 | 400.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 409 | 422 | 320.0 | - |
| SMART | SM00220 | serkin_6 | 584 | 864 | 2.4E-42 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 87 | 112 | 5.9 | - |
| SMART | SM00365 | LRR_sd22_2 | 254 | 280 | 84.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 385 | 408 | 300.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 864 | 39.93351 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 612 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 709 | 721 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 472 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_004249911.1 | receptor protein kinase TMK1 [Solanum lycopersicum] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CF06 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004849 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology