Basic Information
Locus ID:
SOLCI001343300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1639 | 43721 | 45903 | - | SOLCI001343300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 37,576.17 Da | 28.24 | 80.26 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 34 | 154 | 3.34452E-30 | IPR033734 |
| CDD | cd09612 | Jacalin | 202 | 338 | 1.28541E-32 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 31 | 155 | 1.6E-17 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 202 | 338 | 3.5E-24 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 191 | 338 | 3.27E-34 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 13 | 154 | 1.83E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 178 | 339 | 3.6E-44 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 10 | 175 | 7.7E-41 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 202 | 340 | 3.5E-22 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 23 | 156 | 3.7E-16 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 191 | 340 | 43.686253 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 12 | 156 | 32.421837 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_010320393.1 | jacalin-related lectin 3-like [Solanum lycopersicum] | 0 |
| P82859 | Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BYI9 | Jacalin-type lectin domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology