Basic Information
Locus ID:
SOLCI001343200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1639 | 40984 | 42961 | + | SOLCI001343200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 34,093.33 Da | 33.02 | 77.54 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 166 | 306 | 1.7154E-34 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 166 | 306 | 1.7E-20 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 85 | 120 | 3.5E-5 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 155 | 306 | 2.22E-32 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 13 | 119 | 5.89E-17 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 146 | 307 | 8.1E-41 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 15 | 74 | 6.0E-8 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 75 | 121 | 3.1E-10 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 24 | 121 | 0.0036 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 166 | 308 | 1.3E-19 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 155 | 308 | 41.650967 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 13 | 121 | 12.247177 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_015072826.1 | agglutinin-like [Solanum pennellii] | 0 |
| P82859 | Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BX02 | Jacalin-type lectin domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004532 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology