Basic Information
Locus ID:
SOLCI001231200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold15772 | 17267 | 20009 | + | SOLCI001231200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 68,220.16 Da | 35.51 | 88.80 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 296 | 568 | 1.80157E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 291 | 499 | 1.6E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 47 | 126 | 2.3E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 144 | 217 | 4.9E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 584 | 2.29E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 250 | 365 | 5.1E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 138 | 235 | 1.9E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 128 | 4.9E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 366 | 576 | 2.2E-57 | - |
| SMART | SM00220 | serkin_6 | 290 | 581 | 3.3E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 128 | 14.044784 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 290 | 581 | 38.138493 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 133 | 243 | 11.872279 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 296 | 318 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 411 | 423 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_025885212.1 | cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AK50 | Cysteine-rich receptor-like protein kinase 2 OS=Solanum chilense OX=4083 GN=EJD97_004139 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology