Basic Information
Locus ID:
SOLCI001211100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1567 | 44683 | 55156 | + | SOLCI001211100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 130,331.76 Da | 51.93 | 80.38 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 759 | 1047 | 2.52516E-170 | - |
| Pfam | PF00069 | Protein kinase domain | 753 | 1031 | 6.2E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 750 | 1086 | 4.05E-90 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 751 | 1069 | 1.6E-105 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 837 | 1060 | 1.6E-105 | - |
| SMART | SM00220 | serkin_6 | 753 | 1042 | 4.8E-104 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1043 | 1147 | 8.757219 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 753 | 1042 | 51.254845 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 872 | 884 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 168 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_004235102.1 | probable serine/threonine protein kinase IRE [Solanum lycopersicum] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BU58 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004048 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology