Basic Information
Locus ID:
SOLCI001077400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1491 | 79199 | 95467 | + | SOLCI001077400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 25,184.72 Da | 49.54 | 78.82 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 104 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015068633.1 | E3 ubiquitin-protein ligase BIG BROTHER [Solanum pennellii] | 0 |
| TrEMBL | A0A6N2C0Q6 | PITH domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_003619 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Solanum chilense | 1 | SOLCI001077400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107013168 |