Basic Information
Locus ID:
SOLCI001040900
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1473 | 35459 | 39019 | - | SOLCI001040900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 73,198.72 Da | 30.97 | 91.99 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 591 | 4.29467E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 242 | 1.6E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 72 | 133 | 1.2E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 326 | 590 | 3.5E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 304 | 607 | 1.75E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 244 | 3.5E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 397 | 1.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 596 | 2.5E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 42 | 135 | 2.9E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 322 | 590 | 4.3E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 606 | 36.329338 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 135 | 13.936158 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 244 | 14.832315 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 655 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015063409.1 | cysteine-rich receptor-like protein kinase 42 [Solanum pennellii] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BU95 | Cysteine-rich receptor-like protein kinase 42 OS=Solanum chilense OX=4083 GN=EJD97_003482 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology