Basic Information
Locus ID:
SOLCI000998800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1448 | 64429 | 68664 | - | SOLCI000998800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 109,301.67 Da | 33.45 | 99.18 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 504 | 561 | 3.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 687 | 898 | 9.8E-45 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 427 | 5.89E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 977 | 2.83E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 363 | 615 | 8.96E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 989 | 3.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 310 | 626 | 2.2E-81 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 762 | 8.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 205 | 7.1E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 309 | 3.6E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 685 | 983 | 2.3E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 989 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 691 | 719 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 808 | 820 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_004231961.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum lycopersicum] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BW86 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_003340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology