Basic Information
Locus ID:
SOLCI000964000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1434 | 65682 | 69109 | + | SOLCI000964000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 108,373.87 Da | 30.42 | 97.75 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 523 | 581 | 1.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 91 | 149 | 8.5E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 60 | 5.9E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 684 | 958 | 4.9E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 308 | 608 | 8.5E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 960 | 1.75E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 71 | 391 | 1.96E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 329 | 1.2E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 258 | 9.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 200 | 1.2E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 766 | 1.8E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 615 | 4.1E-82 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 975 | 3.0E-62 | - |
| SMART | SM00220 | serkin_6 | 681 | 964 | 3.1E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 4.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 210 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 473 | 497 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 566 | 591 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 521 | 545 | 61.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 964 | 39.354015 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 710 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_004243383.1 | receptor-like protein kinase HSL1 [Solanum lycopersicum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BU99 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_003205 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology