Basic Information
Locus ID:
SOLCI000848200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1371 | 78415 | 82005 | + | SOLCI000848200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 110,145.88 Da | 31.41 | 102.74 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 689 | 910 | 2.8E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 4.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 177 | 2.9E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 305 | 5.78E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 967 | 4.86E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 368 | 592 | 2.38E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 281 | 375 | 2.27E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 180 | 1.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 282 | 2.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 615 | 4.6E-55 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 383 | 5.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 654 | 774 | 1.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 980 | 4.8E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 524 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 525 | 549 | 180.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 687 | 967 | 1.1E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 970 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 716 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_004232923.1 | receptor-like protein kinase HSL1 [Solanum lycopersicum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BX62 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_002886 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology