Basic Information
Locus ID:
SOLCI000552200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold12217 | 8816 | 9955 | - | SOLCI000552200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 43,385.14 Da | 45.91 | 87.20 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 93 | 364 | 6.1E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 367 | 1.78E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 62 | 378 | 1.8E-28 | - |
| SMART | SM00220 | serkin_6 | 57 | 364 | 4.9E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 364 | 21.827856 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14480.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004248628.2 | serine/threonine-protein kinase BLUS1-like [Solanum lycopersicum] | 0 |
| O23304 | Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana OX=3702 GN=BLUS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AU33 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_001952 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg18682, jg1869, jg8331 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30003640 |
| Apiaceae | Apium graveolens | 2 | Ag2G02557, AgUnG00499 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132613084, gene-LOC132613089, gene-LOC132613094 ... |
| Solanaceae | Solanum chilense | 5 | SOLCI000552200, SOLCI001268300, SOLCI001371800 ... |
| Solanaceae | Solanum pennellii | 7 | gene-LOC107019742, gene-LOC107032678, gene-LOC107032679 ... |