Basic Information
Locus ID:
SOLCI000495800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1197 | 140849 | 142699 | + | SOLCI000495800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 69,002.99 Da | 40.91 | 92.69 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 187 | 231 | 2.60152E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 342 | 607 | 2.3E-33 | IPR001245 |
| Pfam | PF01476 | LysM domain | 191 | 232 | 6.6E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 608 | 4.76E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 616 | 5.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 403 | 1.9E-13 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 175 | 245 | 9.6E-8 | IPR036779 |
| SMART | SM00257 | LysM_2 | 188 | 232 | 0.0084 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 231 | 11.101394 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 608 | 29.191669 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_004233647.1 | protein LYK5-like [Solanum lycopersicum] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2C084 | Protein LYK5-like OS=Solanum chilense OX=4083 GN=EJD97_001734 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology