Basic Information
Locus ID:
SOLCI000301400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1108 | 69501 | 73098 | + | SOLCI000301400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 61,059.08 Da | 30.43 | 81.42 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 439 | 502 | 5.43802E-12 | IPR002048 |
| CDD | cd00051 | EFh | 368 | 427 | 2.63146E-13 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 61 | 319 | 2.64835E-136 | - |
| Pfam | PF13499 | EF-hand domain pair | 438 | 501 | 3.3E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 62 | 320 | 8.0E-76 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 380 | 430 | 6.0E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 359 | 501 | 2.95E-37 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 328 | 5.13E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 330 | 504 | 2.7E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 148 | 329 | 2.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 64 | 147 | 3.2E-29 | - |
| SMART | SM00054 | efh_1 | 439 | 467 | 1.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 403 | 431 | 0.45 | IPR002048 |
| SMART | SM00220 | serkin_6 | 62 | 320 | 9.5E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 367 | 395 | 2.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 476 | 504 | 0.0031 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 62 | 320 | 48.837929 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 472 | 507 | 11.249643 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 11.472807 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 363 | 398 | 13.537066 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 399 | 434 | 9.910664 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 68 | 95 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 412 | 424 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 182 | 194 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 485 | 497 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 376 | 388 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 448 | 460 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 42 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010322474.2 | calcium-dependent protein kinase 24 [Solanum lycopersicum] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BZC7 | Calcium-dependent protein kinase 24 OS=Solanum chilense OX=4083 GN=EJD97_001120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology