Basic Information
Locus ID:
SOLCI000206800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold10739 | 7174 | 9207 | - | SOLCI000206800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 75,754.99 Da | 44.78 | 85.08 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 627 | 1.74746E-85 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 15 | 244 | 4.51678E-53 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 32 | 242 | 1.4E-36 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 357 | 623 | 1.0E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 645 | 6.56E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 18 | 241 | 2.43E-40 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 243 | 2.2E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 631 | 3.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 434 | 1.0E-22 | - |
| SMART | SM00220 | serkin_6 | 356 | 633 | 8.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 633 | 33.544941 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 481 | 493 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | NP_001307546.1 | clade XIII lectin receptor kinase precursor [Solanum lycopersicum] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AQ24 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_000811 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology