Basic Information
Locus ID:
SOLCI000166100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1056 | 1019 | 3972 | - | SOLCI000166100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 56,543.79 Da | 42.84 | 91.26 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 190 | 456 | 1.32643E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 186 | 453 | 1.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 168 | 460 | 1.75E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 474 | 3.5E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 164 | 259 | 1.2E-34 | - |
| SMART | SM00220 | serkin_6 | 184 | 455 | 2.5E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 463 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 306 | 318 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 190 | 213 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 508 | - | - |
| Coils | Coil | Coil | 204 | 224 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015082351.1 | probable receptor-like protein kinase At2g42960 [Solanum pennellii] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6N2C6Y5 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_000670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology