Basic Information
Locus ID:
SOLCI000086600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1025 | 162818 | 167401 | + | SOLCI000086600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 62,224.80 Da | 38.17 | 80.60 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 48 | 493 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 330 | 493 | 1.9E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 59 | 199 | 1.1E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 501 | 6.72E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 494 | 8.2E-78 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 141 | 2.0E-39 | - |
| SMART | SM00220 | serkin_6 | 59 | 493 | 2.4E-52 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 493 | 29.8277 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 186 | 198 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_049406825.1 | uncharacterized protein LOC125870431 isoform X2 [Solanum stenotomum] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A6N2C7D8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_000387 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology