Basic Information
Locus ID:
SOLCI000035600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Lateral organ boundaries (LOB) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold10074 | 3756 | 5042 | + | SOLCI000035600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 20,154.98 Da | 44.53 | 87.08 | -0.41 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50510.1 | LOB domain-containing protein 28. | 0 |
| RefSeq | XP_004253529.1 | LOB domain-containing protein 24-like, partial [Solanum lycopersicum] | 0 |
| Q9SCS4 | LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2ASH5 | LOB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_000211 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag10G01448 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00002940, Pov_00036838 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132619749, gene-LOC132619801 |
| Solanaceae | Solanum chilense | 1 | SOLCI000035600 |
| Solanaceae | Solanum pennellii | 5 | gene-LOC107025095, gene-LOC107029960, gene-LOC107029962 ... |