Basic Information
Locus ID:
SOLCI000005900
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1 | 445584 | 446910 | + | SOLCI000005900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 47,235.21 Da | 36.74 | 89.86 | -0.02 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_015064935.1 | F-box protein CPR1-like [Solanum pennellii] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2CI70 | FBA_1 domain-containing protein (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_000052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 7 | gene-LOC132601986, gene-LOC132601987, gene-LOC132603133 ... |
| Solanaceae | Solanum chilense | 6 | SOLCI000005900, SOLCI001662300, SOLCI001819600 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107001609, gene-LOC107010212, gene-LOC107025894 ... |