Basic Information
Locus ID:
SOLCI000003000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1 | 248822 | 252863 | + | SOLCI000003000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 12,999.97 Da | 44.10 | 94.24 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 3.53424E-45 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 116 | 1.1E-40 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 96 | 9.87E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.2E-41 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 2.4E-47 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 9.373519 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_004231760.1 | membrane-anchored ubiquitin-fold protein 4 isoform X1 [Solanum lycopersicum] | 0 |
| Q9LSD8 | Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7FEF6 | Membrane-anchored ubiquitin-fold protein OS=Solanum lycopersicum OX=4081 GN=101262467 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology