halophFGD

Basic Information

Locus ID: Pt_Chr0705463

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Legume lectin domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr07	162732166	162737112	-	Pt_Chr0705463

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.59	45,719.44 Da	29.61	84.26	-0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06899	lectin_legume_LecRK_Arcelin_ConA	42	280	6.86234E-54	IPR001220
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	348	409	9.8E-9	IPR001245
Pfam	PF00139	Legume lectin domain	43	281	3.4E-44	IPR001220
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	323	408	5.86E-13	IPR011009
SUPERFAMILY	SSF49899	Concanavalin A-like lectins/glucanases	41	288	3.08E-50	IPR013320
Gene3D	G3DSA:2.60.120.200	-	40	287	3.4E-51	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	327	418	2.9E-19	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	346	425	9.54541	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	352	379	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0030246 (carbohydrate binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G04960.2	-
RefSeq	XP_047057537.1	L-type lectin-domain containing receptor kinase IX.2-like [Lolium rigidum]
Swiss-Prot	O24313	Basic agglutinin OS=Psophocarpus tetragonolobus OX=3891 GN=WBAI PE=1 SV=1
TrEMBL	A0A0Q3PQX6	Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100831170 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	5	AH04.1995, BH04.2001, BH04.2004, BH04.2007, BH04.2008
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.2HG0097640.1, HORVU.MOREX.r3.2HG0097720.1 ... HORVU.MOREX.r3.2HG0097650.1.CDS1, HORVU.MOREX.r3.6HG0547110.1, HORVU.MOREX.r3.6HG0547150.1, HORVU.MOREX.r3.6HG0547200.1.CDS1, HORVU.MOREX.r3.6HG0547220.1, HORVU.MOREX.r3.7HG0742570.1
Poaceae	Lolium multiflorum	15	gene-QYE76_004354, gene-QYE76_004356, gene-QYE76_004362 ... gene-QYE76_004397, gene-QYE76_008651, gene-QYE76_008654, gene-QYE76_008693, gene-QYE76_024691, gene-QYE76_024994, gene-QYE76_029419, gene-QYE76_037010, gene-QYE76_037093, gene-QYE76_048878, gene-QYE76_049021, gene-QYE76_049290
Poaceae	Oryza coarctata	2	Oco08G000910, Oco08G000950
Poaceae	Oryza sativa	16	LOC_Os04g03370.1, LOC_Os04g03380.1, LOC_Os04g03530.1 ... LOC_Os04g03579.1, LOC_Os04g04670.1, LOC_Os04g04690.1, LOC_Os04g04770.1, LOC_Os04g04790.1, LOC_Os04g04800.1, LOC_Os04g05470.1, LOC_Os04g05560.1, LOC_Os04g05580.1, LOC_Os04g06090.1, LOC_Os04g06244.1, LOC_Os07g26170.1, LOC_Os10g03950.1
Poaceae	Paspalum vaginatum	10	gene-BS78_K006300, gene-BS78_K006400, gene-BS78_K006500 ... gene-BS78_K006600, gene-BS78_K006700, gene-BS78_K007600, gene-BS78_K007700, gene-BS78_K286700, gene-BS78_K287400, gene-BS78_K287500
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0300137, Pt_Chr0402868, Pt_Chr0500818, Pt_Chr0500820 ... Pt_Chr0500915, Pt_Chr0702711, Pt_Chr0705463
Poaceae	Thinopyrum elongatum	7	Tel1E01G056800, Tel2E01G048600, Tel2E01G048700 ... Tel2E01G049900, Tel2E01G050800, Tel6E01G134100, Tel7E01G866800
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG001630, gene_TRIDC2BG001740 ... gene_TRIDC2BG001830, gene_TRIDC2BG001850, gene_TRIDC2BG001870, gene_TRIDC7AG016980
Poaceae	Triticum aestivum	9	TraesCS2B02G007400.2, TraesCS2B02G008400.1 ... TraesCS2B02G024000.1, TraesCS2B02G024100.1, TraesCS2D02G017500.1, TraesCS2D02G017600.1, TraesCS6A02G054000.1, TraesCS6D02G076100.1, TraesCSU02G075400.1