Basic Information
Locus ID:
Pt_Chr0705224
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
UBA1
Description:
Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin- E1 thioester and free AMP
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 155058474 | 155064723 | - | Pt_Chr0705224 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 124,795.19 Da | 35.61 | 85.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 122 | 507 | 2.92895E-155 | - |
| CDD | cd01490 | Ube1_repeat2 | 539 | 1079 | 0.0 | - |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 297 | 367 | 2.4E-27 | IPR032418 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 369 | 438 | 6.7E-22 | IPR032420 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 707 | 961 | 2.4E-81 | IPR019572 |
| Pfam | PF00899 | ThiF family | 124 | 499 | 8.1E-30 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 1032 | 1121 | 2.4E-25 | IPR018965 |
| Pfam | PF00899 | ThiF family | 520 | 1020 | 4.1E-74 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 515 | 1016 | 4.58E-127 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 116 | 504 | 7.59E-103 | IPR035985 |
| Gene3D | G3DSA:3.40.50.720 | - | 540 | 1019 | 5.6E-189 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 114 | 231 | 2.2E-38 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 692 | 968 | 5.6E-189 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 285 | 366 | 2.5E-109 | IPR042302 |
| Gene3D | G3DSA:3.40.50.12550 | - | 242 | 530 | 2.5E-109 | - |
| Gene3D | G3DSA:3.10.290.60 | - | 1034 | 1124 | 3.5E-23 | IPR038252 |
| SMART | SM00985 | UBA_e1_C_a_2 | 999 | 1121 | 4.1E-50 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 117 | 1126 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 699 | 707 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 482 | 490 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 567 | 590 | 3.2E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 768 | 795 | 3.2E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 614 | 639 | 3.2E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 259 | 286 | 3.2E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 144 | 168 | 3.2E-64 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_037433799.1 | ubiquitin-activating enzyme E1 2 [Triticum dicoccoides] | 0 |
| P31251 | Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum OX=4565 GN=UBA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7UE36 | E1 ubiquitin-activating enzyme OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology