Basic Information
Locus ID:
Pt_Chr0704849
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 142430654 | 142442832 | + | Pt_Chr0704849 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 148,628.55 Da | 49.98 | 67.33 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 89 | 364 | 1.08287E-121 | - |
| CDD | cd14016 | STKc_CK1 | 768 | 1044 | 1.50569E-119 | - |
| Pfam | PF00069 | Protein kinase domain | 89 | 376 | 2.6E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 768 | 1056 | 8.6E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 372 | 4.99E-58 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 767 | 1052 | 9.85E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 56 | 406 | 6.0E-80 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 732 | 1089 | 5.7E-79 | - |
| SMART | SM00220 | serkin_6 | 89 | 393 | 3.1E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 768 | 1073 | 7.2E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1048 | 23.071648 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 368 | 23.538069 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 807 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 95 | 127 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 895 | 907 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 753 | - | - |
| Coils | Coil | Coil | 689 | 712 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_051184800.1 | casein kinase 1-like protein HD16 [Lolium perenne] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5YRM3 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_021599 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology