Basic Information
Locus ID:
Pt_Chr0704674
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 137634835 | 137635212 | - | Pt_Chr0704674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.71 | 10,077.29 Da | 52.45 | 79.04 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 64 | 2.62E-9 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 22 | 70 | 6.4E-7 | IPR037176 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037432029.1 | thaumatin-like pathogenesis-related protein 3 [Triticum dicoccoides] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KCF5 | Thaumatin-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology