Basic Information
Locus ID:
Pt_Chr0704574
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 135405164 | 135411291 | + | Pt_Chr0704574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 113,157.15 Da | 45.22 | 83.50 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 631 | 919 | 6.26374E-172 | - |
| Pfam | PF00069 | Protein kinase domain | 625 | 914 | 1.7E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 622 | 941 | 1.62E-90 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 932 | 5.2E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 623 | 942 | 5.2E-106 | - |
| SMART | SM00220 | serkin_6 | 625 | 914 | 1.8E-104 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 914 | 51.353783 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 915 | 1020 | 9.509697 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 744 | 756 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 793 | 815 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_047050396.1 | probable serine/threonine protein kinase IRE [Lolium rigidum] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6MK20 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology