Basic Information
Locus ID:
Pt_Chr0704361
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 128964697 | 128966916 | - | Pt_Chr0704361 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 82,330.32 Da | 46.16 | 84.41 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 200 | 276 | 1.1E-7 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 413 | 682 | 1.5E-43 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 137 | 3.5E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 706 | 5.68E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 706 | 1.2E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 184 | 278 | 6.7E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 140 | 8.9E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 490 | 3.5E-31 | - |
| SMART | SM00220 | serkin_6 | 412 | 691 | 4.9E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 694 | 35.566105 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 175 | 280 | 15.212504 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 38 | 140 | 17.077238 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 534 | 546 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 418 | 442 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 729 | - | - |
| Coils | Coil | Coil | 295 | 315 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_047049877.1 | L-type lectin-domain containing receptor kinase IX.1-like [Lolium rigidum] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | M7Y9M9 | L-type lectin-domain containing receptor kinase IX.1 OS=Triticum urartu OX=4572 GN=TRIUR3_06923 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0430550.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000893, gene-QYE76_000897 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704361 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G113900 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5AG007920, gene_TRIDC5BG009480 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS5A02G051100.1.cds1, TraesCS5B02G056900.1.cds1 ... |