Basic Information
Locus ID:
Pt_Chr0704353
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 128797341 | 128797845 | + | Pt_Chr0704353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 15,407.42 Da | 74.27 | 75.42 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 144 | 3.3E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 53 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044329466.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum aestivum] | 0 |
| TrEMBL | A0A5J6CY91 | Hv-LecRK OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah001975, Ah001976 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30062370 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0944 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate01g31340, gene.Thate01g31360, gene.Thate06g23940 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0430540.1.CDS1 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g16670.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704353 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G005290 |
| Poaceae | Zea mays | 1 | Zm00001eb148870_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16554 |