Basic Information
Locus ID:
Pt_Chr0704303
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 127022105 | 127023876 | + | Pt_Chr0704303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 36,864.59 Da | 34.59 | 80.61 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 147 | 257 | 4.55859E-48 | - |
| CDD | cd00121 | MATH | 31 | 131 | 1.77535E-11 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 153 | 261 | 2.5E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 136 | 6.05E-15 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 142 | 263 | 2.36E-33 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 264 | 328 | 3.9E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 138 | 260 | 9.5E-38 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 136 | 3.7E-11 | IPR008974 |
| SMART | SM00225 | BTB_4 | 161 | 265 | 1.5E-25 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 12 | 131 | 8.603402 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 161 | 228 | 19.485489 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047095181.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7JWC5 | BTB domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology