Basic Information
Locus ID:
Pt_Chr0704184
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 123811779 | 123817330 | + | Pt_Chr0704184 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 123,333.70 Da | 45.48 | 75.92 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 851 | 1108 | 1.83751E-108 | - |
| CDD | cd06410 | PB1_UP2 | 89 | 184 | 1.00001E-45 | - |
| Pfam | PF00564 | PB1 domain | 105 | 185 | 1.7E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 847 | 1108 | 6.8E-63 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 101 | 186 | 1.26E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 834 | 1107 | 1.09E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 933 | 1123 | 1.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 838 | 932 | 3.5E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 106 | 187 | 3.9E-13 | - |
| SMART | SM00220 | serkin_6 | 845 | 1114 | 8.9E-55 | IPR000719 |
| SMART | SM00666 | PB1_new | 100 | 187 | 9.2E-29 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 845 | 1114 | 41.304508 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 970 | 982 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 851 | 876 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 964 | 982 | 3.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 927 | 940 | 3.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1035 | 1057 | 3.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1079 | 1101 | 3.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 305 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_047048723.1 | dual specificity protein kinase splB-like [Lolium rigidum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LF67 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology