Basic Information
Locus ID:
Pt_Chr0704161
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 123194767 | 123202332 | + | Pt_Chr0704161 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 180,200.88 Da | 48.53 | 93.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 174 | 420 | 5.3E-64 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 464 | 2.98E-76 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 415 | 469 | 8.9E-6 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 162 | 414 | 1.6E-79 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 166 | 439 | 3.9E-68 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 168 | 415 | 65.819809 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 240 | 261 | 1.8E-23 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 402 | 420 | 1.8E-23 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 369 | 386 | 1.8E-23 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 103 | - | - |
| Coils | Coil | Coil | 960 | 980 | - | - |
| Coils | Coil | Coil | 1557 | 1595 | - | - |
| Coils | Coil | Coil | 1002 | 1029 | - | - |
| Coils | Coil | Coil | 1319 | 1339 | - | - |
| Coils | Coil | Coil | 620 | 668 | - | - |
| Coils | Coil | Coil | 1291 | 1314 | - | - |
| Coils | Coil | Coil | 492 | 512 | - | - |
| Coils | Coil | Coil | 1354 | 1381 | - | - |
| Coils | Coil | Coil | 1200 | 1220 | - | - |
| Coils | Coil | Coil | 850 | 870 | - | - |
| Coils | Coil | Coil | 1235 | 1262 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_037439554.1 | kinesin-like protein KIN-12F isoform X1 [Triticum dicoccoides] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A8I6YDD7 | Kinesin motor domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology