Basic Information
Locus ID:
Pt_Chr0704142
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 122690261 | 122704203 | - | Pt_Chr0704142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 345,510.66 Da | 53.73 | 91.87 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 265 | 593 | 2.9E-106 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 259 | 627 | 3.33E-113 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 254 | 605 | 3.3E-131 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 257 | 601 | 1.7E-160 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 259 | 593 | 116.961227 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 491 | 502 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 492 | 510 | 5.8E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 331 | 352 | 5.8E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 459 | 476 | 5.8E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 545 | 566 | 5.8E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3020 | 3049 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2589 | 2609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3017 | 3049 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2588 | 2616 | - | - |
| Coils | Coil | Coil | 2986 | 3013 | - | - |
| Coils | Coil | Coil | 694 | 714 | - | - |
| Coils | Coil | Coil | 2535 | 2590 | - | - |
| Coils | Coil | Coil | 2625 | 2652 | - | - |
| Coils | Coil | Coil | 1130 | 1248 | - | - |
| Coils | Coil | Coil | 1340 | 1381 | - | - |
| Coils | Coil | Coil | 600 | 627 | - | - |
| Coils | Coil | Coil | 2664 | 2684 | - | - |
| Coils | Coil | Coil | 1270 | 1325 | - | - |
| Coils | Coil | Coil | 2395 | 2415 | - | - |
| Coils | Coil | Coil | 1470 | 1490 | - | - |
| Coils | Coil | Coil | 967 | 1029 | - | - |
| Coils | Coil | Coil | 1431 | 1451 | - | - |
| Coils | Coil | Coil | 2032 | 2052 | - | - |
| Coils | Coil | Coil | 2451 | 2499 | - | - |
| Coils | Coil | Coil | 2800 | 2852 | - | - |
| Coils | Coil | Coil | 1653 | 1680 | - | - |
| Coils | Coil | Coil | 2721 | 2741 | - | - |
| Coils | Coil | Coil | 1526 | 1553 | - | - |
| Coils | Coil | Coil | 2897 | 2917 | - | - |
| Coils | Coil | Coil | 1699 | 1726 | - | - |
| Coils | Coil | Coil | 2360 | 2387 | - | - |
| Coils | Coil | Coil | 2155 | 2189 | - | - |
| Coils | Coil | Coil | 2936 | 2963 | - | - |
| Coils | Coil | Coil | 1056 | 1076 | - | - |
| Coils | Coil | Coil | 850 | 877 | - | - |
| Coils | Coil | Coil | 1766 | 1803 | - | - |
| Coils | Coil | Coil | 1102 | 1122 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_051184730.1 | kinesin-like protein KIN-12F [Lolium perenne] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6MLU7 | Kinesin motor domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology