Basic Information
Locus ID:
Pt_Chr0704135
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 122415896 | 122429884 | - | Pt_Chr0704135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 348,346.66 Da | 53.63 | 91.62 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 278 | 606 | 2.9E-106 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 272 | 640 | 3.37E-113 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 267 | 618 | 3.3E-131 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 270 | 614 | 1.7E-160 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 272 | 606 | 116.961227 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 504 | 515 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 505 | 523 | 5.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 558 | 579 | 5.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 344 | 365 | 5.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 472 | 489 | 5.9E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3041 | 3072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3043 | 3072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2601 | 2629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2602 | 2622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 224 | - | - |
| Coils | Coil | Coil | 1143 | 1261 | - | - |
| Coils | Coil | Coil | 1483 | 1503 | - | - |
| Coils | Coil | Coil | 2373 | 2400 | - | - |
| Coils | Coil | Coil | 3009 | 3036 | - | - |
| Coils | Coil | Coil | 2548 | 2603 | - | - |
| Coils | Coil | Coil | 2638 | 2665 | - | - |
| Coils | Coil | Coil | 1444 | 1464 | - | - |
| Coils | Coil | Coil | 2464 | 2512 | - | - |
| Coils | Coil | Coil | 2677 | 2697 | - | - |
| Coils | Coil | Coil | 613 | 640 | - | - |
| Coils | Coil | Coil | 1666 | 1693 | - | - |
| Coils | Coil | Coil | 2813 | 2875 | - | - |
| Coils | Coil | Coil | 2045 | 2065 | - | - |
| Coils | Coil | Coil | 1779 | 1816 | - | - |
| Coils | Coil | Coil | 980 | 1042 | - | - |
| Coils | Coil | Coil | 1353 | 1394 | - | - |
| Coils | Coil | Coil | 1712 | 1739 | - | - |
| Coils | Coil | Coil | 1069 | 1089 | - | - |
| Coils | Coil | Coil | 707 | 727 | - | - |
| Coils | Coil | Coil | 2168 | 2202 | - | - |
| Coils | Coil | Coil | 1115 | 1135 | - | - |
| Coils | Coil | Coil | 2959 | 2986 | - | - |
| Coils | Coil | Coil | 2920 | 2940 | - | - |
| Coils | Coil | Coil | 863 | 890 | - | - |
| Coils | Coil | Coil | 1539 | 1566 | - | - |
| Coils | Coil | Coil | 2408 | 2428 | - | - |
| Coils | Coil | Coil | 2734 | 2754 | - | - |
| Coils | Coil | Coil | 1283 | 1338 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_051184730.1 | kinesin-like protein KIN-12F [Lolium perenne] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6MLU7 | Kinesin motor domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology